Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | E1729_09290 | Not Available | Positive | 1898481 - 1898759 | 10360.3 |
| Dna modification methyltransferase | E1729_09295 | Not Available | Positive | 1898771 - 1899013 | 8971.61 |
| Membrane protein | E1729_09300 | Not Available | Positive | 1899010 - 1899123 | 4237.5 |
| hypothetical protein | E1729_09305 | Not Available | Positive | 1899217 - 1899627 | 15065.2 |
| Hypothetical protein | E1729_09310 | Not Available | Positive | 1899651 - 1899854 | 7986.54 |
| Marr family transcriptional regulator | E1729_09315 | Not Available | Positive | 1899851 - 1900117 | 9482.42 |
| Hypothetical protein | E1729_09320 | Not Available | Positive | 1900114 - 1900413 | 11194.6 |
| hypothetical protein | E1729_09325 | Not Available | Negative | 1900464 - 1900679 | 8017.45 |
| Derepression protein | E1729_09330 | Not Available | Positive | 1900736 - 1900966 | 9024.86 |
| Hypothetical protein | E1729_09335 | Not Available | Positive | 1901039 - 1901404 | 13799.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





