Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage baseplate assembly protein v | E1729_09155 | Not Available | Positive | 1872697 - 1873293 | 21440.1 |
| Putative baseplate assembly protein with lysozyme | E1729_09160 | Not Available | Positive | 1873348 - 1873695 | 13288.0 |
| Baseplate protein | E1729_09165 | Not Available | Positive | 1873686 - 1874789 | 39645.1 |
| Gp25, tail fiber | E1729_09170 | Not Available | Positive | 1874782 - 1875360 | 21332.4 |
| Tail protein | E1729_09175 | Not Available | Positive | 1875363 - 1876694 | 46624.1 |
| Tail fiber assembly protein | E1729_09180 | Not Available | Positive | 1876694 - 1877308 | 22281.8 |
| Tail fiber protein | E1729_09185 | Not Available | Negative | 1877315 - 1877776 | 16691.6 |
| Tail fiber | E1729_09190 | Not Available | Negative | 1877787 - 1878227 | 16031.8 |
| Recombinase family protein | E1729_09195 | Not Available | Positive | 1878287 - 1878859 | 21638.7 |
| Attr | Not Available | Not Available | Positive | 1893728 - 1893742 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





