Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-dependent methylglyoxal reductase | E1729_03585 | Not Available | Positive | 739309 - 740289 | 36258.9 |
| deor/glpr transcriptional regulator | E1729_03590 | Not Available | Positive | 740426 - 741184 | 28238.0 |
| mfs transporter | E1729_03595 | Not Available | Positive | 741302 - 742660 | 50284.0 |
| bifunctional nicotinamidase/pyrazinamidase | E1729_03600 | Not Available | Negative | 742753 - 743394 | 23335.4 |
| asparaginase | E1729_03605 | Not Available | Negative | 743405 - 744421 | 37158.5 |
| simpl domain-containing protein | E1729_03610 | Not Available | Negative | 744553 - 745263 | 25241.9 |
| signal peptide peptidase sppa | E1729_03615 | Not Available | Negative | 745379 - 747235 | 67263.0 |
| nad(p)h nitroreductase | E1729_03620 | Not Available | Positive | 747396 - 747947 | 20059.2 |
| selenide, water dikinase seld | E1729_03625 | Not Available | Positive | 748064 - 749107 | 36703.5 |
| dna topoisomerase iii | E1729_03630 | Not Available | Positive | 749112 - 751067 | 73264.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





