Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 1 maturation protease | DI389_03935 | Not Available | Positive | 777429 - 778016 | 21547.7 |
| hydrogenase-1 operon protein hyae | DI389_03940 | Not Available | Positive | 778013 - 778411 | 14890.6 |
| hydrogenase-1 operon protein hyaf | DI389_03945 | Not Available | Positive | 778408 - 779265 | 31432.5 |
| cytochrome bd-ii ubiquinol oxidase subunit 1 | DI389_03950 | Not Available | Positive | 779399 - 780943 | 57924.2 |
| cytochrome bd-ii ubiquinol oxidase subunit 2 | DI389_03955 | Not Available | Positive | 780955 - 782091 | 42426.3 |
| cytochrome bd-ii oxidase subunit cbdx | DI389_03960 | Not Available | Positive | 782104 - 782196 | 3597.68 |
| phytase appa | DI389_03965 | Not Available | Positive | 782276 - 783574 | 47093.5 |
| tyrosine-protein kinase etk | DI389_03970 | Not Available | Negative | 783689 - 785869 | 81246.5 |
| protein-tyrosine-phosphatase | DI389_03975 | Not Available | Negative | 785889 - 786335 | 16386.9 |
| polysaccharide export protein wza | DI389_03980 | Not Available | Negative | 786323 - 787462 | 41743.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





