Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf421 domain-containing protein | DI389_03575 | Not Available | Positive | 698422 - 699114 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | DI389_03580 | Not Available | Positive | 699313 - 700401 | 39785.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DI389_03585 | Not Available | Positive | 700472 - 701755 | 46098.5 |
| metalloprotease | DI389_03590 | Not Available | Positive | 701924 - 702688 | 26768.7 |
| cytidylate kinase | DI389_03595 | Not Available | Positive | 702861 - 703544 | 24747.8 |
| 30s ribosomal protein s1 | DI389_03600 | Not Available | Positive | 703655 - 705328 | 61161.5 |
| integration host factor subunit beta | DI389_03605 | Not Available | Positive | 705488 - 705772 | 10651.8 |
| comec family protein | DI389_03610 | Not Available | Positive | 705980 - 708244 | 84459.9 |
| lipid a export atp-binding/permease msba | DI389_03615 | Not Available | Positive | 708281 - 710029 | 64464.6 |
| tetraacyldisaccharide 4'-kinase | DI389_03620 | Not Available | Positive | 710026 - 711012 | 35591.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





