Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI389_03255 | Not Available | Negative | 628756 - 629250 | 17882.4 |
| xre family transcriptional regulator | DI389_03260 | Not Available | Positive | 629491 - 629955 | 16969.1 |
| hypothetical protein | DI389_03265 | Not Available | Positive | 630993 - 631817 | 31168.8 |
| hypothetical protein | DI389_03270 | Not Available | Negative | 631866 - 632438 | 21711.4 |
| hypothetical protein | DI389_03280 | Not Available | Positive | 632539 - 632889 | 13503.5 |
| is30-like element is30 family transposase | DI389_03285 | Not Available | Negative | 632929 - 633454 | 20194.7 |
| 30s ribosomal protein s6--l-glutamate ligase | DI389_03290 | Not Available | Positive | 633627 - 634529 | 32438.5 |
| ybjn domain-containing protein | DI389_03295 | Not Available | Positive | 634617 - 635093 | 17667.1 |
| putrescine/spermidine abc transporter substrate-binding protein | DI389_03300 | Not Available | Positive | 635299 - 635460 | 6387.65 |
| putrescine transport atp-binding protein potg | DI389_03310 | Not Available | Positive | 636651 - 637784 | 41933.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





