Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DI389_03040 | Not Available | Positive | 584328 - 585353 | 35645.3 |
| sugar abc transporter permease yjff | DI389_03045 | Not Available | Positive | 585340 - 586335 | 35008.0 |
| fructose 1,6-bisphosphatase | DI389_03050 | Not Available | Negative | 586368 - 587366 | 36836.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | DI389_03055 | Not Available | Positive | 587542 - 588915 | 49839.9 |
| ribosome-associated protein | DI389_03060 | Not Available | Negative | 589071 - 589622 | 21360.5 |
| metalloprotease pmba | DI389_03065 | Not Available | Positive | 589717 - 591069 | 48372.4 |
| cytochrome b562 | DI389_03070 | Not Available | Positive | 591252 - 591638 | 14034.7 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | DI389_03075 | Not Available | Negative | 591683 - 592147 | 17490.9 |
| anaerobic ribonucleoside-triphosphate reductase | DI389_03080 | Not Available | Negative | 592305 - 594443 | 79980.9 |
| alpha,alpha-phosphotrehalase | DI389_03085 | Not Available | Negative | 594837 - 596492 | 63833.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





