Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 517621 - 517696 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 517732 - 517807 | Not Available |
| hypothetical protein | DI389_02685 | Not Available | Positive | 518041 - 518094 | 2056.38 |
| trna epoxyqueuosine(34) reductase queg | DI389_02690 | Not Available | Negative | 518077 - 519216 | 43075.4 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DI389_02695 | Not Available | Positive | 519215 - 520762 | 54653.5 |
| trna (n6-adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase tsae | DI389_02700 | Not Available | Positive | 520734 - 521195 | 16854.0 |
| n-acetylmuramoyl-l-alanine amidase | DI389_02705 | Not Available | Positive | 521214 - 522551 | 47988.0 |
| dna mismatch repair protein mutl | DI389_02710 | Not Available | Positive | 522561 - 524408 | 67927.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DI389_02715 | Not Available | Positive | 524401 - 525351 | 35067.1 |
| rna-binding protein hfq | DI389_02720 | Not Available | Positive | 525437 - 525745 | 11167.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





