Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | DI389_12615 | Not Available | Negative | 2465221 - 2465445 | 8263.8 |
| Hypothetical protein | DI389_12620 | Not Available | Negative | 2465445 - 2465747 | 11285.8 |
| Hypothetical protein | DI389_12625 | Not Available | Negative | 2465747 - 2465971 | 8308.9 |
| Replication gene b protein | DI389_12630 | Not Available | Negative | 2466035 - 2466535 | 19941.1 |
| Cox | DI389_12635 | Not Available | Negative | 2466705 - 2466977 | 10459.7 |
| C protein | DI389_12640 | Not Available | Positive | 2467114 - 2467407 | 10583.8 |
| Phage integrase | DI389_12645 | Not Available | Positive | 2467477 - 2468457 | 36987.0 |
| Attr | Not Available | Not Available | Positive | 2468594 - 2468620 | Not Available |
| periplasmic protein cpxp | DI389_12650 | Not Available | Negative | 2468644 - 2469144 | 18966.4 |
| Putative dna-binding response regulator | DI389_12655 | Not Available | Positive | 2469294 - 2469992 | 26313.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





