Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI389_02475 | Not Available | Positive | 477733 - 478029 | 11468.6 |
| duf2566 domain-containing protein | DI389_02480 | Not Available | Positive | 478057 - 478230 | 6555.44 |
| lysine--trna ligase heat inducible | DI389_02485 | Not Available | Negative | 478349 - 479866 | 57829.9 |
| mfs transporter | DI389_02490 | Not Available | Negative | 480103 - 481560 | 53039.7 |
| lysine decarboxylase cada | DI389_02495 | Not Available | Negative | 481619 - 483766 | 81264.7 |
| cadaverine/lysine antiporter | DI389_02500 | Not Available | Negative | 483846 - 485180 | 46667.8 |
| transcriptional regulator | DI389_02505 | Not Available | Negative | 485545 - 487083 | 57816.1 |
| hypothetical protein | DI389_02510 | Not Available | Positive | 487370 - 487588 | 8073.77 |
| Trna-phe | Not Available | Not Available | Positive | 487700 - 487775 | Not Available |
| transcriptional regulator | DI389_02520 | Not Available | Negative | 487882 - 488457 | 21932.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





