Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | DI389_02260 | Not Available | Negative | 437350 - 438240 | 32364.1 |
| ribose 5-phosphate isomerase b | DI389_02270 | Not Available | Positive | 438599 - 439048 | 16074.3 |
| protein yjdp | DI389_02275 | Not Available | Positive | 439117 - 439446 | 13421.3 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | DI389_02280 | Not Available | Negative | 439593 - 440351 | 27849.3 |
| protein phno | DI389_02285 | Not Available | Negative | 440353 - 440787 | 16570.8 |
| ribose 1,5-bisphosphate phosphokinase phnn | DI389_02290 | Not Available | Negative | 440774 - 441331 | 20730.8 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | DI389_02295 | Not Available | Negative | 441331 - 442467 | 42011.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnl | DI389_02300 | Not Available | Negative | 442464 - 443144 | 24706.9 |
| abc transporter atp-binding protein | DI389_02305 | Not Available | Negative | 443255 - 444013 | 27832.6 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase | DI389_02310 | Not Available | Negative | 444010 - 444855 | 31846.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





