Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | DI389_12565 | Not Available | Negative | 2453532 - 2454275 | 27467.7 |
| Major capsid protein | DI389_12570 | Not Available | Negative | 2454279 - 2455352 | 40218.8 |
| Capsid scaffolding protein | DI389_12575 | Not Available | Negative | 2455411 - 2456265 | 31461.2 |
| Gpp | DI389_12580 | Not Available | Positive | 2456439 - 2458211 | 66588.2 |
| Putative portal protein | DI389_12585 | Not Available | Positive | 2458211 - 2459230 | 38610.3 |
| Putative para protein | DI389_12590 | Not Available | Negative | 2459303 - 2460439 | 42613.2 |
| hypothetical protein | DI389_12595 | Not Available | Negative | 2460736 - 2461377 | 24166.4 |
| imma/irre family metallo-endopeptidase | DI389_12600 | Not Available | Negative | 2461381 - 2462376 | 36056.2 |
| Gpa | DI389_12605 | Not Available | Negative | 2462680 - 2464959 | 86070.5 |
| Hypothetical protein | DI389_12610 | Not Available | Negative | 2464949 - 2465224 | 10138.1 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





