Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | DI389_01790 | Not Available | Negative | 337848 - 338320 | 18108.5 |
| hypothetical protein | DI389_01805 | Not Available | Positive | 338723 - 339106 | 14447.7 |
| acetyltransferase | DI389_01810 | Not Available | Negative | 339169 - 339612 | 16473.7 |
| homoserine o-succinyltransferase | DI389_01815 | Not Available | Positive | 339769 - 340698 | 35715.1 |
| malate synthase a | DI389_01820 | Not Available | Positive | 340967 - 342568 | 60276.9 |
| isocitrate lyase | DI389_01825 | Not Available | Positive | 342598 - 343902 | 47524.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | DI389_01830 | Not Available | Positive | 344183 - 345919 | 67672.3 |
| ankyrin repeat protein a | DI389_01835 | Not Available | Negative | 345888 - 348074 | 82602.9 |
| iclr family transcriptional regulator | DI389_01840 | Not Available | Negative | 348391 - 349215 | 29741.1 |
| methionine synthase | DI389_01845 | Not Available | Positive | 349415 - 353098 | 136005.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





