Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DI389_01685 | Not Available | Positive | 310325 - 311677 | 49145.0 |
| glucarate dehydratase-related protein | DI389_01690 | Not Available | Positive | 311679 - 313019 | 48912.4 |
| glucarate dehydratase | DI389_01695 | Not Available | Positive | 313040 - 314380 | 49184.0 |
| signal transduction histidine kinase | DI389_01700 | Not Available | Negative | 314611 - 317367 | 102460.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DI389_01705 | Not Available | Positive | 317424 - 318725 | 48145.2 |
| gtp diphosphokinase | DI389_01710 | Not Available | Positive | 318773 - 321007 | 83928.5 |
| antitoxin maze | DI389_01715 | Not Available | Positive | 321085 - 321333 | 9356.24 |
| mrna interferase mazf | DI389_01720 | Not Available | Positive | 321333 - 321668 | 12098.7 |
| nucleoside triphosphate pyrophosphohydrolase | DI389_01725 | Not Available | Positive | 321740 - 322531 | 30428.0 |
| ctp synthetase | DI389_01730 | Not Available | Positive | 322759 - 324396 | 60377.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





