Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactaldehyde reductase | DI389_01635 | Not Available | Positive | 299364 - 300512 | 40515.7 |
| flap endonuclease xni | DI389_01640 | Not Available | Negative | 300617 - 301372 | 28153.7 |
| l-serine ammonia-lyase | DI389_01645 | Not Available | Negative | 301483 - 302850 | 48725.8 |
| serine transporter | DI389_01650 | Not Available | Negative | 302908 - 304197 | 46909.2 |
| log family protein ygdh | DI389_01655 | Not Available | Negative | 304753 - 306117 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DI389_01660 | Not Available | Negative | 306229 - 307077 | 32531.1 |
| secy-interacting protein | DI389_01665 | Not Available | Positive | 307145 - 307690 | 20656.5 |
| hypothetical protein | DI389_01670 | Not Available | Positive | 308312 - 308641 | 12745.1 |
| trna pseudouridine(65) synthase truc | DI389_01675 | Not Available | Positive | 308641 - 309423 | 29681.5 |
| flavodoxin | DI389_01680 | Not Available | Positive | 309441 - 309890 | 16284.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





