Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 279890 - 279966 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 280000 - 280076 | Not Available |
| murein transglycosylase a | DI389_01545 | Not Available | Positive | 280285 - 281382 | 40412.9 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | DI389_01550 | Not Available | Positive | 281621 - 282427 | 28563.6 |
| sulfur acceptor protein csde | DI389_01555 | Not Available | Negative | 282478 - 282921 | 15941.2 |
| cysteine desulfurase csda | DI389_01560 | Not Available | Negative | 282921 - 284126 | 43236.6 |
| ygdi/ygdr family lipoprotein | DI389_01565 | Not Available | Positive | 284318 - 284545 | 8174.67 |
| glycine cleavage system transcriptional activator | DI389_01570 | Not Available | Positive | 284896 - 285813 | 34403.4 |
| duf423 domain-containing protein | DI389_01575 | Not Available | Positive | 285832 - 286227 | 14334.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | DI389_01580 | Not Available | Positive | 286220 - 287320 | 41907.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





