Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate protein | DI389_12515 | Not Available | Negative | 2449363 - 2449998 | 22189.3 |
| Tail completion protein | DI389_12520 | Not Available | Negative | 2450065 - 2450517 | 17257.9 |
| Tail completion protein | DI389_12525 | Not Available | Negative | 2450510 - 2450977 | 17333.7 |
| Lysc | DI389_12530 | Not Available | Negative | 2450940 - 2451113 | 6158.16 |
| Lysin | DI389_12535 | Not Available | Negative | 2451085 - 2451510 | 15784.9 |
| Holin | DI389_12540 | Not Available | Negative | 2451498 - 2451923 | 15555.6 |
| Endolysin | DI389_12545 | Not Available | Negative | 2451938 - 2452435 | 18495.1 |
| Holin | DI389_12550 | Not Available | Negative | 2452435 - 2452716 | 9787.61 |
| Baseplate protein x | DI389_12555 | Not Available | Negative | 2452720 - 2452923 | 7083.45 |
| Head completion/stabilization protein | DI389_12560 | Not Available | Negative | 2452923 - 2453432 | 19076.8 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





