Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DI389_26220 | Not Available | Negative | 5025191 - 5025390 | 7266.11 |
| hypothetical protein | DI389_26225 | Not Available | Negative | 5025450 - 5026946 | 56001.6 |
| hypothetical protein | DI389_26235 | Not Available | Negative | 5028874 - 5029356 | 18907.8 |
| rhs repeat protein | DI389_26240 | Not Available | Negative | 5029340 - 5030230 | 32863.4 |
| dna resolvase | DI389_26250 | Not Available | Positive | 5031784 - 5031876 | 3468.09 |
| is1 family transposase | DI389_26260 | Not Available | Negative | 5033102 - 5033232 | 5037.09 |
| is3-like element is150 family transposase | DI389_26265 | Not Available | Negative | 5033259 - 5034628 | 53107.1 |
| hypothetical protein | DI389_26275 | Not Available | Negative | 5034848 - 5035174 | 12558.1 |
| rhs repeat protein | DI389_26280 | Not Available | Negative | 5035174 - 5036115 | 35334.7 |
| hypothetical protein | DI389_26285 | Not Available | Positive | 5036116 - 5037548 | 53913.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





