Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI389_25940 | Not Available | Positive | 4986397 - 4986576 | 6761.38 |
| hypothetical protein | DI389_25945 | Not Available | Negative | 4986663 - 4986866 | 7598.18 |
| hnh endonuclease | DI389_25950 | Not Available | Negative | 4986928 - 4987785 | 32363.0 |
| hypothetical protein | DI389_25955 | Not Available | Negative | 4987801 - 4988109 | 11773.9 |
| hypothetical protein | DI389_25960 | Not Available | Negative | 4988661 - 4989086 | 15300.5 |
| hnh endonuclease | DI389_25965 | Not Available | Negative | 4989340 - 4990155 | 30595.3 |
| is6 family transposase | DI389_25975 | Not Available | Negative | 4990563 - 4990644 | 3489.39 |
| qnr family pentapeptide repeat protein | DI389_25990 | Not Available | Positive | 4994674 - 4995250 | 21914.6 |
| elongation factor tu | DI389_25995 | Not Available | Negative | 4995251 - 4995476 | 8166.58 |
| Trna-thr | Not Available | Not Available | Positive | 4995591 - 4995666 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





