Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein | DI389_25880 | Not Available | Negative | 4973326 - 4973439 | 4109.77 |
| duf4434 domain-containing protein | DI389_25890 | Not Available | Negative | 4974659 - 4975504 | 31211.4 |
| phage receptor | DI389_25895 | Not Available | Negative | 4975505 - 4978477 | 111318.0 |
| phage adsorption protein nrfb | DI389_25900 | Not Available | Negative | 4978464 - 4980377 | 72586.9 |
| relaxase | DI389_25905 | Not Available | Positive | 4980378 - 4980609 | 8476.1 |
| tetr family transcriptional regulator | DI389_25910 | Not Available | Negative | 4980641 - 4981318 | 24374.9 |
| tetracycline efflux mfs transporter tet(a) | DI389_25915 | Not Available | Positive | 4981397 - 4982596 | 42243.5 |
| eama family transporter | DI389_25920 | Not Available | Negative | 4982628 - 4983512 | 31150.6 |
| cysteine hydrolase | DI389_25925 | Not Available | Negative | 4983650 - 4984042 | 14133.7 |
| dna-binding protein | DI389_25935 | Not Available | Positive | 4985916 - 4986320 | 15089.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





