Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system coupling protein trad | DI389_25015 | Not Available | Negative | 4839114 - 4841306 | 81863.9 |
| sel1 repeat family protein | DI389_25020 | Not Available | Negative | 4841440 - 4842114 | 24730.4 |
| entry exclusion protein | DI389_25025 | Not Available | Negative | 4842189 - 4842620 | 16560.3 |
| hypothetical protein | DI389_25035 | Not Available | Negative | 4844619 - 4844822 | 8594.47 |
| mexx family efflux pump subunit | DI389_25040 | Not Available | Positive | 4844811 - 4845968 | 41320.0 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DI389_25045 | Not Available | Positive | 4845980 - 4849084 | 111492.0 |
| hypothetical protein | DI389_25050 | Not Available | Positive | 4849337 - 4849558 | 7452.14 |
| hypothetical protein | DI389_25055 | Not Available | Negative | 4849468 - 4849752 | 10533.2 |
| hypothetical protein | DI389_25060 | Not Available | Positive | 4849784 - 4849960 | 6700.4 |
| amino acid abc transporter substrate-binding protein | DI389_25065 | Not Available | Positive | 4849989 - 4851014 | 37048.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





