Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | DI389_01370 | Not Available | Negative | 239295 - 239927 | 24387.3 |
| transporter | DI389_01375 | Not Available | Negative | 240387 - 241616 | 45198.0 |
| acetyl-coa acetyltransferase | DI389_01380 | Not Available | Positive | 241871 - 243052 | 41021.2 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DI389_01385 | Not Available | Positive | 243339 - 244175 | 31078.1 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase | DI389_01390 | Not Available | Positive | 244205 - 244966 | 27071.6 |
| arabinose-proton symporter | DI389_01395 | Not Available | Positive | 245281 - 246699 | 51687.6 |
| aspartate/glutamate racemase | DI389_01400 | Not Available | Positive | 246828 - 247520 | 25309.5 |
| lysr family transcriptional regulator | DI389_01405 | Not Available | Negative | 247507 - 248442 | 34379.7 |
| diaminopimelate decarboxylase | DI389_01410 | Not Available | Positive | 248564 - 249826 | 46180.0 |
| transcriptional regulator | DI389_01415 | Not Available | Negative | 249833 - 250864 | 37096.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





