Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | DI389_01320 | Not Available | Negative | 233093 - 233464 | 14109.1 |
| hypothetical protein | DI389_01325 | Not Available | Positive | 233352 - 233540 | 7110.02 |
| hypothetical protein | DI389_01330 | Not Available | Negative | 233607 - 233825 | 8055.23 |
| transcriptional regulator | DI389_01335 | Not Available | Negative | 233993 - 235369 | 52755.8 |
| cesd/sycd/lcrh family type iii secretion system chaperone | DI389_01340 | Not Available | Negative | 235704 - 236195 | 19094.2 |
| hypothetical protein | DI389_01345 | Not Available | Negative | 236463 - 236909 | 16879.5 |
| hypothetical protein | DI389_01350 | Not Available | Positive | 237103 - 237528 | 16213.3 |
| hypothetical protein | DI389_01355 | Not Available | Positive | 237564 - 237644 | 3202.9 |
| hypothetical protein | DI389_01360 | Not Available | Negative | 237677 - 238159 | 18720.5 |
| transcriptional regulator | DI389_01365 | Not Available | Negative | 238152 - 238961 | 30879.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





