Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI389_00550 | Not Available | Negative | 91954 - 92442 | 18156.8 |
| toxin | DI389_00555 | Not Available | Negative | 92439 - 92816 | 13992.7 |
| type iv toxin-antitoxin system yeeu family antitoxin | DI389_00560 | Not Available | Negative | 92863 - 93240 | 13785.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 93407 - 93538 | Not Available |
| duf987 domain-containing protein | DI389_00565 | Not Available | Negative | 93316 - 93537 | 8309.11 |
| Ncrna_class:other | Not Available | Not Available | Positive | 93704 - 93835 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 93882 - 94013 | Not Available |
| dna repair protein radc | DI389_00570 | Not Available | Negative | 93606 - 94052 | 16588.1 |
| antirestriction protein | DI389_00575 | Not Available | Negative | 94098 - 94583 | 18169.3 |
| duf945 domain-containing protein | DI389_00580 | Not Available | Negative | 94675 - 95484 | 30815.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





