Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber assembly | DI389_11275 | Not Available | Positive | 2211538 - 2212065 | 20277.6 |
| Tail fiber assembly protein | DI389_11280 | Not Available | Negative | 2212094 - 2212627 | 20642.4 |
| Tail fiber protein | DI389_11285 | Not Available | Negative | 2212630 - 2213160 | 18886.7 |
| Attl | Not Available | Not Available | Positive | 2437390 - 2437416 | Not Available |
| Putative positive regulator of late gene transcription | DI389_12435 | Not Available | Negative | 2437528 - 2437782 | 9656.61 |
| Tail protein | DI389_12440 | Not Available | Negative | 2437828 - 2438991 | 42875.2 |
| Tail protein | DI389_12445 | Not Available | Negative | 2438991 - 2439470 | 17428.3 |
| Tail length determinator | DI389_12450 | Not Available | Negative | 2439485 - 2441932 | 86474.6 |
| Putative phage tail protein | DI389_12455 | Not Available | Negative | 2441925 - 2442044 | 4560.46 |
| Tail protein | DI389_12460 | Not Available | Negative | 2442077 - 2442352 | 9664.92 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





