Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00645 family protein | DI389_00450 | Not Available | Positive | 75454 - 75948 | 18642.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 75752 - 76128 | Not Available |
| l-glyceraldehyde 3-phosphate reductase | DI389_00455 | Not Available | Negative | 75988 - 77028 | 38834.4 |
| carboxymethylenebutenolidase | DI389_00460 | Not Available | Positive | 77185 - 77328 | 5425.5 |
| duf2623 domain-containing protein | DI389_00470 | Not Available | Positive | 78188 - 78475 | 10946.1 |
| hypothetical protein | DI389_00475 | Not Available | Positive | 78472 - 78657 | 6965.43 |
| hydrogenase-2 small chain | DI389_00480 | Not Available | Positive | 78664 - 79782 | 39654.3 |
| hydrogenase-2 operon protein hyba | DI389_00485 | Not Available | Positive | 79785 - 80771 | 36005.0 |
| ni/fe-hydrogenase b-type cytochrome subunit | DI389_00490 | Not Available | Positive | 80761 - 81939 | 43604.6 |
| hydrogenase-2 large chain | DI389_00495 | Not Available | Positive | 81936 - 83639 | 62494.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





