Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Qin prophage | DI389_20545 | Not Available | Positive | 3973649 - 3973957 | 9926.31 |
| Tail fiber assembly protein | DI389_20550 | Not Available | Positive | 3973957 - 3974532 | 21264.9 |
| Recombinase family protein | DI389_20555 | Not Available | Negative | 3974630 - 3975220 | 21918.8 |
| Hypothetical protein | DI389_20560 | Not Available | Negative | 3975537 - 3975770 | 8778.78 |
| Gp59 | DI389_20565 | Not Available | Positive | 3976556 - 3977839 | 46269.9 |
| hypothetical | DI389_20570 | Not Available | Positive | 3977928 - 3979387 | 54449.7 |
| Putative selenium-binding protein ydfz | DI389_20575 | Not Available | Negative | 3979422 - 3979625 | 7276.83 |
| transcriptional regulator | DI389_20580 | Not Available | Negative | 3979802 - 3980488 | 26566.7 |
| Hypothetical protein | DI389_20585 | Not Available | Negative | 3980577 - 3981323 | 27250.5 |
| Repressor protein ci | DI389_22800 | Not Available | Negative | 4408988 - 4409557 | 21257.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





