Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NGE-022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | DI389_11175 | Not Available | Negative | 2193626 - 2195632 | 74438.1 |
| Beta-ketoacyl-acp synthase i | DI389_11180 | Not Available | Positive | 2195791 - 2197011 | 42615.9 |
| hypothetical protein | DI389_11185 | Not Available | Negative | 2197113 - 2197334 | 8565.36 |
| Mfs transporter | DI389_11190 | Not Available | Positive | 2197276 - 2198454 | 40525.8 |
| Flagella biosynthesis regulator flk | DI389_11195 | Not Available | Negative | 2198451 - 2199446 | 36670.5 |
| hypothetical | DI389_11200 | Not Available | Positive | 2199433 - 2199565 | 4902.97 |
| Type vi secretion protein | DI389_11205 | Not Available | Negative | 2199714 - 2200607 | 33815.8 |
| Zinc ribbon domain-containing protein | DI389_11210 | Not Available | Negative | 2200612 - 2200944 | 11852.0 |
| Hok/gef family protein | DI389_11215 | Not Available | Negative | 2201206 - 2201346 | 5254.64 |
| Ogr/delta-like zinc finger family protein | DI389_11220 | Not Available | Negative | 2201537 - 2201797 | 9678.41 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





