Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical structural protein | HMPREF3040_00751 | Not Available | Negative | 725829 - 726734 | 32828.0 |
| Hypothetical protein | HMPREF3040_00752 | Not Available | Negative | 726734 - 727279 | 18679.8 |
| Hypothetical protein | HMPREF3040_00753 | Not Available | Negative | 727279 - 727743 | 17573.3 |
| Putative head closure protein | HMPREF3040_00754 | Not Available | Negative | 727743 - 730214 | 90447.6 |
| Hypothetical protein | HMPREF3040_00755 | Not Available | Negative | 730214 - 730819 | 22196.1 |
| Hypothetical protein | HMPREF3040_00756 | Not Available | Negative | 730819 - 731142 | 11555.4 |
| Hypothetical protein | HMPREF3040_00757 | Not Available | Negative | 731193 - 731528 | 12480.7 |
| Hypothetical protein | HMPREF3040_00758 | Not Available | Negative | 731539 - 731976 | 15227.9 |
| Major capsid protein | HMPREF3040_00759 | Not Available | Negative | 732028 - 733020 | 36366.2 |
| Hypothetical protein | HMPREF3040_00760 | Not Available | Negative | 733029 - 733730 | 25147.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Hemolytic uremic syndrome | Causes | PMC10648343 |
| Chronic mastitis | Causes | PMC11401738 |
| Colon carcinogenesis | Causes | PMC11704243 |
| Gastrointestinal infections | Causes | PMC3757591 |
| Infection and inflammation both of the bladder and kidneys | Causes | PMC8380466 |
| Urinary tract infections | Causes | PMC9147554 |
| Septicemia | Causes | PMC9147554 |
| Neonatal meningitis | Causes | PMC9147554 |
| Cardiovascular and central nervous system diseases | Causes | PMC9147554 |
| Enteric disease | Causes | PMC9147554 |





