Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | HMPREF3040_00716 | Not Available | Positive | 696071 - 696289 | 8234.01 |
| rna methyltransferase, trmh family, group 2 | HMPREF3040_00717 | Not Available | Negative | 696372 - 696845 | 17727.3 |
| l-lactate dehydrogenase | HMPREF3040_00718 | Not Available | Negative | 696918 - 698108 | 42730.7 |
| putative l-lactate dehydrogenase operon regulatory protein | HMPREF3040_00719 | Not Available | Negative | 698105 - 698881 | 29167.9 |
| l-lactate permease | HMPREF3040_00720 | Not Available | Negative | 698881 - 700536 | 59189.5 |
| hypothetical protein | HMPREF3040_00721 | Not Available | Positive | 700664 - 700846 | 6927.66 |
| hep/hag repeat protein | HMPREF3040_00722 | Not Available | Negative | 700947 - 703727 | 93141.2 |
| hypothetical protein | HMPREF3040_00723 | Not Available | Negative | 703728 - 704115 | 14401.4 |
| transcriptional regulator, gntr family | HMPREF3040_00724 | Not Available | Negative | 704123 - 704833 | 26968.3 |
| gtp-binding protein typa | HMPREF3040_00725 | Not Available | Negative | 705050 - 706873 | 67359.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





