Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biofilm formation regulatory protein bssr | HMPREF3040_00706 | Not Available | Positive | 686897 - 687280 | 14570.6 |
| glucose/sorbosone dehydrogenase | HMPREF3040_00707 | Not Available | Positive | 687391 - 688506 | 41045.8 |
| glutathione s-transferase protein | HMPREF3040_00708 | Not Available | Negative | 688503 - 689129 | 23714.4 |
| d-alanyl-d-alanine carboxypeptidase daca | HMPREF3040_00709 | Not Available | Positive | 689355 - 690578 | 44464.4 |
| deoxyribose operon repressor | HMPREF3040_00710 | Not Available | Negative | 690625 - 691383 | 28581.6 |
| pap2 family protein | HMPREF3040_00711 | Not Available | Negative | 691441 - 692037 | 22433.9 |
| multidrug translocase mdfa | HMPREF3040_00712 | Not Available | Positive | 692322 - 693554 | 44333.8 |
| hypothetical protein | HMPREF3040_00713 | Not Available | Negative | 693595 - 693879 | 9971.24 |
| cof-like hydrolase | HMPREF3040_00714 | Not Available | Negative | 693964 - 694779 | 30207.0 |
| transporter, major facilitator family protein | HMPREF3040_00715 | Not Available | Negative | 694779 - 695933 | 39721.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





