Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, major facilitator family protein | HMPREF3040_00686 | Not Available | Negative | 662825 - 664126 | 47476.8 |
| hypothetical protein | HMPREF3040_00687 | Not Available | Negative | 664166 - 664318 | 5830.97 |
| sugar-binding domain protein | HMPREF3040_00688 | Not Available | Positive | 664343 - 665524 | 43807.0 |
| hypothetical protein | HMPREF3040_00689 | Not Available | Negative | 665491 - 666756 | 47310.9 |
| cof-like hydrolase | HMPREF3040_00690 | Not Available | Negative | 666908 - 667723 | 30429.5 |
| formate c-acetyltransferase | HMPREF3040_00691 | Not Available | Negative | 667869 - 670301 | 90162.6 |
| glycyl-radical enzyme activating protein family protein | HMPREF3040_00692 | Not Available | Negative | 670307 - 671233 | 34205.2 |
| fructose-6-phosphate aldolase | HMPREF3040_00693 | Not Available | Positive | 671331 - 671999 | 23286.6 |
| molybdopterin synthase sulfurylase moeb | HMPREF3040_00694 | Not Available | Negative | 672075 - 672824 | 26705.5 |
| molybdopterin biosynthesis protein moea | HMPREF3040_00695 | Not Available | Negative | 672824 - 674059 | 43966.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





