Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantetheine-phosphate adenylyltransferase | HMPREF3040_00656 | Not Available | Positive | 630197 - 630676 | 17895.7 |
| dna-formamidopyrimidine glycosylase | HMPREF3040_00657 | Not Available | Negative | 630715 - 631524 | 30261.8 |
| ribosomal protein l33 | HMPREF3040_00658 | Not Available | Negative | 631622 - 631789 | 6371.94 |
| ribosomal protein l28 | HMPREF3040_00659 | Not Available | Negative | 631810 - 632010 | 7695.37 |
| dna repair protein radc | HMPREF3040_00660 | Not Available | Negative | 632263 - 632937 | 25487.2 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | HMPREF3040_00661 | Not Available | Positive | 633103 - 634323 | 43466.7 |
| dutp diphosphatase | HMPREF3040_00662 | Not Available | Positive | 634301 - 634759 | 16288.7 |
| hth-type protein slma | HMPREF3040_00663 | Not Available | Positive | 634866 - 635462 | 22837.7 |
| orotate phosphoribosyltransferase | HMPREF3040_00664 | Not Available | Negative | 635499 - 636155 | 24129.0 |
| trna nucleotidyltransferase | HMPREF3040_00665 | Not Available | Negative | 636206 - 636922 | 25313.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





