Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like protein | HMPREF3040_00636 | Not Available | Negative | 607927 - 608358 | 15597.2 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | HMPREF3040_00637 | Not Available | Positive | 608459 - 610147 | 61752.0 |
| peptidase, m23 family | HMPREF3040_00638 | Not Available | Positive | 610157 - 611440 | 47485.6 |
| divergent polysaccharide deacetylase | HMPREF3040_00639 | Not Available | Positive | 611444 - 612403 | 35424.9 |
| glycosyltransferase, group 2 family protein | HMPREF3040_00640 | Not Available | Negative | 612390 - 613424 | 40447.5 |
| l-threonine 3-dehydrogenase | HMPREF3040_00641 | Not Available | Negative | 613663 - 614688 | 37243.2 |
| glycine c-acetyltransferase | HMPREF3040_00642 | Not Available | Negative | 614698 - 615894 | 43119.5 |
| hypothetical protein | HMPREF3040_00643 | Not Available | Negative | 616170 - 617042 | 34013.6 |
| adp-glyceromanno-heptose 6-epimerase | HMPREF3040_00644 | Not Available | Positive | 617331 - 618263 | 34896.0 |
| lipopolysaccharide heptosyltransferase ii | HMPREF3040_00645 | Not Available | Positive | 618273 - 619319 | 39002.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





