Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | HMPREF3040_03602 | Not Available | Positive | 3454581 - 3454970 | 14412.9 |
| Tail component | HMPREF3040_03603 | Not Available | Positive | 3454963 - 3455723 | 26436.6 |
| Attl | Not Available | Not Available | Positive | 3665567 - 3665581 | Not Available |
| Integrase | HMPREF3040_03831 | Not Available | Negative | 3665655 - 3666725 | 40280.3 |
| Hypothetical protein | HMPREF3040_03832 | Not Available | Negative | 3667036 - 3667380 | 13340.8 |
| Putative ninc protein | HMPREF3040_03833 | Not Available | Negative | 3667377 - 3668192 | 31496.9 |
| Hypothetical protein | HMPREF3040_03834 | Not Available | Negative | 3668246 - 3668809 | 21447.1 |
| Hypothetical protein | HMPREF3040_03835 | Not Available | Negative | 3668910 - 3669734 | 30492.2 |
| Hypothetical protein | HMPREF3040_03836 | Not Available | Negative | 3669800 - 3670180 | 13809.5 |
| Hypothetical protein | HMPREF3040_03837 | Not Available | Positive | 3670380 - 3670712 | 12447.4 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





