Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline porter ii | HMPREF3040_00626 | Not Available | Positive | 598085 - 599587 | 54849.1 |
| sensory histidine kinase in two-component regulatory system with basr | HMPREF3040_00627 | Not Available | Negative | 599764 - 600855 | 41019.8 |
| transcriptional regulatory protein basr | HMPREF3040_00628 | Not Available | Negative | 600865 - 601533 | 25002.3 |
| arylsulfatase | HMPREF3040_00629 | Not Available | Negative | 601530 - 603203 | 62720.9 |
| arginine/agmatine antiporter | HMPREF3040_00630 | Not Available | Negative | 603277 - 604614 | 46845.3 |
| transcriptional regulator, arac family | HMPREF3040_00631 | Not Available | Negative | 604751 - 605020 | 10263.3 |
| serine o-acetyltransferase | HMPREF3040_00632 | Not Available | Negative | 605083 - 605904 | 29318.4 |
| glycerol-3-phosphate dehydrogenase | HMPREF3040_00633 | Not Available | Negative | 605984 - 607003 | 36372.8 |
| protein-export chaperone secb | HMPREF3040_00634 | Not Available | Negative | 607003 - 607470 | 17278.3 |
| glutaredoxin 3 | HMPREF3040_00635 | Not Available | Negative | 607533 - 607784 | 9152.03 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





