Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar-phosphate isomerase, rpib/laca/lacb family | HMPREF3040_00606 | Not Available | Positive | 581727 - 582044 | 11513.7 |
| hypothetical protein | HMPREF3040_00607 | Not Available | Positive | 582113 - 582442 | 13496.4 |
| phosphonate metabolism protein phnp | HMPREF3040_00608 | Not Available | Negative | 582477 - 583106 | 23479.0 |
| acetyltransferase, gnat family | HMPREF3040_00609 | Not Available | Negative | 583237 - 583671 | 16584.8 |
| phosphonate metabolism protein/1,5-bisphosphokinase phnn | HMPREF3040_00610 | Not Available | Negative | 583658 - 584215 | 20703.7 |
| phosphonate metabolism protein phnm | HMPREF3040_00611 | Not Available | Negative | 584215 - 585351 | 42061.9 |
| phosphonate c-p lyase system protein phnl | HMPREF3040_00612 | Not Available | Negative | 585348 - 586028 | 24676.0 |
| phosphonate c-p lyase system protein phnk | HMPREF3040_00613 | Not Available | Negative | 586139 - 586897 | 27818.6 |
| phosphonate metabolism protein phnj | HMPREF3040_00614 | Not Available | Negative | 586894 - 587739 | 31860.9 |
| bacterial phosphonate metabolism protein phni | HMPREF3040_00615 | Not Available | Negative | 587732 - 588796 | 38942.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





