Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor tu family protein | HMPREF3040_00586 | Not Available | Positive | 560517 - 560647 | 4638.59 |
| acetate--coa ligase | HMPREF3040_00587 | Not Available | Negative | 560716 - 562674 | 72093.5 |
| hypothetical protein | HMPREF3040_00588 | Not Available | Positive | 562785 - 562970 | 7236.26 |
| formate-dependent cytochrome c nitrite reductase | HMPREF3040_00589 | Not Available | Positive | 563066 - 564502 | 53793.8 |
| cytochrome c nitrite reductase, pentaheme subunit | HMPREF3040_00590 | Not Available | Positive | 564547 - 565113 | 20642.6 |
| cytochrome c nitrite reductase, fe-s protein | HMPREF3040_00591 | Not Available | Positive | 565110 - 565781 | 24568.8 |
| cytochrome c nitrite reductase, nrfd subunit | HMPREF3040_00592 | Not Available | Positive | 565778 - 566734 | 35001.4 |
| cytochrome c-type biogenesis protein ccmf | HMPREF3040_00593 | Not Available | Positive | 566865 - 568472 | 59606.0 |
| cytochrome c nitrite reductase, accessory protein nrff | HMPREF3040_00594 | Not Available | Positive | 568465 - 568848 | 14616.1 |
| formate-dependent nitrite reductase complex subunit nrfg | HMPREF3040_00595 | Not Available | Positive | 568845 - 569441 | 22802.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





