Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase, fkbp-type slyd | HMPREF3040_00576 | Not Available | Positive | 553349 - 553939 | 20854.1 |
| slyx family protein | HMPREF3040_00577 | Not Available | Negative | 553988 - 554206 | 8248.81 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type fkpa | HMPREF3040_00578 | Not Available | Positive | 554427 - 555239 | 28913.4 |
| yheo-like protein | HMPREF3040_00579 | Not Available | Positive | 555406 - 556128 | 26822.1 |
| sulfur relay protein tusd/dsre | HMPREF3040_00580 | Not Available | Positive | 556128 - 556514 | 13615.0 |
| sulfur relay protein tusc/dsrf | HMPREF3040_00581 | Not Available | Positive | 556514 - 556873 | 13076.7 |
| sulfur relay protein tusb/dsrh | HMPREF3040_00582 | Not Available | Positive | 556881 - 557168 | 10692.9 |
| ribosomal protein s12 | HMPREF3040_00583 | Not Available | Positive | 557294 - 557668 | 13737.9 |
| ribosomal protein s7 | HMPREF3040_00584 | Not Available | Positive | 557765 - 558235 | 17605.4 |
| translation elongation factor g | HMPREF3040_00585 | Not Available | Positive | 558332 - 560446 | 77643.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





