Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integral membrane protein, yccs/yhfk family | HMPREF3040_00566 | Not Available | Negative | 542953 - 545043 | 79502.7 |
| catabolite protein activator | HMPREF3040_00567 | Not Available | Negative | 545094 - 545726 | 23641.9 |
| osmc-like protein | HMPREF3040_00568 | Not Available | Positive | 546028 - 546432 | 14517.6 |
| phosphoribulokinase/uridine kinase family protein | HMPREF3040_00569 | Not Available | Negative | 546487 - 547356 | 32345.9 |
| hypothetical protein | HMPREF3040_00570 | Not Available | Negative | 547410 - 547628 | 8470.04 |
| hydrolase, alpha/beta domain protein | HMPREF3040_00571 | Not Available | Negative | 547622 - 548644 | 38473.3 |
| abc transporter, atp-binding protein | HMPREF3040_00572 | Not Available | Negative | 548644 - 550557 | 71866.6 |
| flavodoxin-like protein | HMPREF3040_00573 | Not Available | Positive | 550685 - 551239 | 20959.1 |
| glutathione-regulated potassium-efflux system protein kefb | HMPREF3040_00574 | Not Available | Positive | 551239 - 553044 | 66399.3 |
| hypothetical protein | HMPREF3040_00575 | Not Available | Positive | 553054 - 553254 | 7629.19 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





