Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00546 | Not Available | Positive | 524710 - 525615 | 33528.4 |
| prd domain protein, ef_0829/aha_3910 family | HMPREF3040_00547 | Not Available | Positive | 525632 - 525994 | 13545.5 |
| alanine racemase domain protein | HMPREF3040_00548 | Not Available | Positive | 526078 - 527241 | 42365.8 |
| metalloenzyme family protein | HMPREF3040_00549 | Not Available | Positive | 527241 - 528467 | 44517.2 |
| phosphotriesterase family protein | HMPREF3040_00550 | Not Available | Positive | 528464 - 529342 | 32767.2 |
| hypothetical protein | HMPREF3040_00551 | Not Available | Positive | 529353 - 529706 | 12479.5 |
| hypothetical protein | HMPREF3040_00552 | Not Available | Positive | 529718 - 531022 | 46511.2 |
| hypothetical protein | HMPREF3040_00553 | Not Available | Positive | 531034 - 532119 | 38843.1 |
| hypothetical protein | HMPREF3040_00554 | Not Available | Negative | 532226 - 532393 | 5819.16 |
| uroporphyrinogen-iii c-methyltransferase | HMPREF3040_00555 | Not Available | Negative | 532645 - 534018 | 49935.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





