Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin hslo | HMPREF3040_00526 | Not Available | Negative | 506530 - 507414 | 32810.8 |
| heat shock protein 15 | HMPREF3040_00527 | Not Available | Negative | 507433 - 507834 | 15496.7 |
| had hydrolase, family ia, variant 3 | HMPREF3040_00528 | Not Available | Negative | 507845 - 508513 | 25425.2 |
| intracellular growth attenuator protein igaa | HMPREF3040_00529 | Not Available | Negative | 508578 - 510713 | 79444.4 |
| hypothetical protein | HMPREF3040_00530 | Not Available | Negative | 510710 - 510829 | 4343.52 |
| adp compounds hydrolase nude | HMPREF3040_00531 | Not Available | Positive | 511033 - 511593 | 21138.4 |
| penicillin-binding protein 1a | HMPREF3040_00532 | Not Available | Negative | 511761 - 514337 | 94496.5 |
| hypothetical protein | HMPREF3040_00533 | Not Available | Positive | 514406 - 515212 | 30059.2 |
| fimbrial assembly protein piln | HMPREF3040_00534 | Not Available | Positive | 515212 - 515751 | 20781.2 |
| hypothetical protein | HMPREF3040_00535 | Not Available | Positive | 515735 - 516175 | 16743.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





