Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna 3'-phosphate cyclase | HMPREF3040_00506 | Not Available | Positive | 480179 - 481198 | 36241.0 |
| maltose regulon activator malt | HMPREF3040_00507 | Not Available | Negative | 481241 - 483946 | 103022.0 |
| maltodextrin phosphorylase | HMPREF3040_00508 | Not Available | Positive | 484569 - 486962 | 90511.4 |
| 4-alpha-glucanotransferase | HMPREF3040_00509 | Not Available | Positive | 486972 - 489053 | 78405.6 |
| high-affinity gluconate transporter | HMPREF3040_00510 | Not Available | Negative | 489101 - 490417 | 45969.6 |
| iscr-regulated protein yhgi | HMPREF3040_00511 | Not Available | Negative | 490778 - 491353 | 20998.9 |
| comf family protein | HMPREF3040_00512 | Not Available | Negative | 491412 - 492095 | 25737.8 |
| carboxylesterase bioh | HMPREF3040_00513 | Not Available | Positive | 492133 - 492903 | 28571.8 |
| hypothetical protein | HMPREF3040_00514 | Not Available | Negative | 493123 - 494016 | 33987.1 |
| ferrous iron transport protein | HMPREF3040_00515 | Not Available | Negative | 494218 - 494454 | 8630.63 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





