Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | HMPREF3040_00496 | Not Available | Positive | 470640 - 471116 | 16889.8 |
| gram-negative pili assembly chaperone domain protein | HMPREF3040_00497 | Not Available | Positive | 471109 - 471861 | 28051.0 |
| fimbrial protein | HMPREF3040_00498 | Not Available | Positive | 471854 - 473005 | 41696.1 |
| hypothetical protein | HMPREF3040_00499 | Not Available | Positive | 473168 - 473287 | 4319.58 |
| glycerol-3-phosphate dehydrogenase | HMPREF3040_00500 | Not Available | Negative | 473512 - 475017 | 56721.8 |
| thiosulfate sulfurtransferase glpe | HMPREF3040_00501 | Not Available | Positive | 475207 - 475533 | 12083.1 |
| rhomboid protease glpg | HMPREF3040_00502 | Not Available | Positive | 475578 - 476408 | 31308.5 |
| glycerol-3-phosphate regulon repressor | HMPREF3040_00503 | Not Available | Positive | 476425 - 477183 | 28049.6 |
| sigma-54 interaction domain protein | HMPREF3040_00504 | Not Available | Negative | 477165 - 478763 | 60214.5 |
| protein rtcb | HMPREF3040_00505 | Not Available | Positive | 478952 - 480178 | 45184.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





