Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | HMPREF3040_00485 | Not Available | Positive | 454523 - 455686 | 42385.0 |
| 1,4-alpha-glucan branching enzyme | HMPREF3040_00487 | Not Available | Positive | 455959 - 458145 | 84359.5 |
| glycogen debranching enzyme glgx | HMPREF3040_00488 | Not Available | Positive | 458142 - 460115 | 73608.6 |
| glucose-1-phosphate adenylyltransferase | HMPREF3040_00489 | Not Available | Positive | 460112 - 461428 | 49542.5 |
| starch | HMPREF3040_00490 | Not Available | Positive | 461428 - 462861 | 52825.4 |
| glycogen phosphorylase | HMPREF3040_00491 | Not Available | Positive | 462880 - 465327 | 93131.6 |
| fimbrial protein | HMPREF3040_00492 | Not Available | Positive | 465859 - 466515 | 22378.7 |
| gram-negative pili assembly chaperone domain protein | HMPREF3040_00493 | Not Available | Positive | 466636 - 467388 | 27886.8 |
| fimbrial usher protein | HMPREF3040_00494 | Not Available | Positive | 467430 - 470021 | 95865.9 |
| fimbrial protein | HMPREF3040_00495 | Not Available | Positive | 470021 - 470584 | 20222.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





