Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter, atp-binding protein livf | HMPREF3040_00465 | Not Available | Positive | 436802 - 437515 | 26297.9 |
| hypothetical protein | HMPREF3040_00466 | Not Available | Positive | 437582 - 437698 | 4659.79 |
| abc transporter, solute-binding protein | HMPREF3040_00467 | Not Available | Positive | 437913 - 439229 | 48481.3 |
| abc transporter, permease protein | HMPREF3040_00468 | Not Available | Positive | 439372 - 440214 | 31398.4 |
| abc transporter, permease protein | HMPREF3040_00469 | Not Available | Positive | 440211 - 441056 | 31473.6 |
| abc transporter, atp-binding protein | HMPREF3040_00470 | Not Available | Positive | 441058 - 442128 | 39561.3 |
| glycerophosphodiester phosphodiesterase family protein | HMPREF3040_00471 | Not Available | Positive | 442125 - 442868 | 27354.0 |
| hypothetical protein | HMPREF3040_00472 | Not Available | Negative | 442855 - 443295 | 16594.9 |
| gamma-glutamyltransferase | HMPREF3040_00473 | Not Available | Positive | 443415 - 445157 | 61828.5 |
| hypothetical protein | HMPREF3040_00474 | Not Available | Negative | 445195 - 445479 | 10603.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





