Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyl carrier protein | HMPREF3040_00435 | Not Available | Negative | 412883 - 413134 | 9584.55 |
| putative acyl carrier protein | HMPREF3040_00436 | Not Available | Negative | 413146 - 413403 | 9243.98 |
| acyltransferase | HMPREF3040_00437 | Not Available | Negative | 413378 - 414217 | 31075.2 |
| hypothetical protein | HMPREF3040_00438 | Not Available | Negative | 414196 - 414918 | 26844.9 |
| methyltransferase domain protein | HMPREF3040_00439 | Not Available | Negative | 414959 - 416017 | 39307.8 |
| hypothetical protein | HMPREF3040_00440 | Not Available | Negative | 416086 - 416463 | 13751.2 |
| putative autoinducer 2 exporter tqsa | HMPREF3040_00441 | Not Available | Negative | 416855 - 417985 | 41315.1 |
| transporter, major facilitator family protein | HMPREF3040_00442 | Not Available | Positive | 418003 - 419253 | 43458.1 |
| protein dcrb | HMPREF3040_00443 | Not Available | Negative | 419257 - 419856 | 21545.9 |
| putative membrane protein | HMPREF3040_00444 | Not Available | Negative | 419887 - 420552 | 25304.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





