Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00414 | Not Available | Negative | 393952 - 394113 | 6072.31 |
| acetyl-coa carboxylase, biotin carboxyl carrier protein | HMPREF3040_00415 | Not Available | Positive | 394255 - 394725 | 16688.2 |
| acetyl-coa carboxylase, biotin carboxylase subunit | HMPREF3040_00416 | Not Available | Positive | 394736 - 396085 | 49323.7 |
| hypothetical protein | HMPREF3040_00417 | Not Available | Positive | 396194 - 396436 | 9108.28 |
| sodium/pantothenate symporter | HMPREF3040_00418 | Not Available | Positive | 396426 - 397877 | 51735.3 |
| ribosomal protein l11 methyltransferase | HMPREF3040_00419 | Not Available | Positive | 397889 - 398770 | 31878.8 |
| pp_00407 | HMPREF3040_00420 | Not Available | Positive | 399099 - 400064 | Not Available |
| dna-binding protein fis | HMPREF3040_00421 | Not Available | Positive | 400090 - 400386 | 11240.6 |
| dna (cytosine-5-)-methyltransferase | HMPREF3040_00422 | Not Available | Positive | 400472 - 401356 | 33362.2 |
| hypothetical protein | HMPREF3040_00423 | Not Available | Positive | 401440 - 401619 | 7203.93 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





