Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease g | HMPREF3040_00404 | Not Available | Negative | 384477 - 385946 | 55367.4 |
| septum formation protein maf | HMPREF3040_00405 | Not Available | Negative | 385936 - 386529 | 21458.7 |
| rod shape-determining protein mred | HMPREF3040_00406 | Not Available | Negative | 386538 - 387026 | 18788.9 |
| rod shape-determining protein mrec | HMPREF3040_00407 | Not Available | Negative | 387026 - 388042 | 36708.6 |
| rod shape-determining protein mreb | HMPREF3040_00408 | Not Available | Negative | 388108 - 389151 | 36954.7 |
| hypothetical protein | HMPREF3040_00409 | Not Available | Positive | 389259 - 389447 | 7062.6 |
| diguanylate cyclase domain protein | HMPREF3040_00410 | Not Available | Negative | 389456 - 391396 | 73389.7 |
| quinone oxidoreductase, yhdh/yhfp family | HMPREF3040_00411 | Not Available | Positive | 391548 - 392522 | 34683.9 |
| hypothetical protein | HMPREF3040_00412 | Not Available | Positive | 392664 - 393389 | 27397.4 |
| hypothetical protein | HMPREF3040_00413 | Not Available | Positive | 393686 - 393850 | 6335.14 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





