Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glutamate synthase | HMPREF3040_00374 | Not Available | Positive | 350145 - 354641 | 164645.0 |
| pyridine nucleotide-disulfide oxidoreductase | HMPREF3040_00375 | Not Available | Positive | 354654 - 356072 | 52032.3 |
| hypothetical protein | HMPREF3040_00376 | Not Available | Positive | 356256 - 357383 | 43544.3 |
| yhch/yjgk/yial family protein | HMPREF3040_00377 | Not Available | Negative | 357443 - 357907 | 17052.8 |
| putative n-acetylmannosamine kinase | HMPREF3040_00378 | Not Available | Negative | 357904 - 358779 | 29704.8 |
| mannac-6-p epimerase | HMPREF3040_00379 | Not Available | Negative | 358776 - 359465 | 24075.0 |
| putative sialic acid transporter | HMPREF3040_00380 | Not Available | Negative | 359513 - 361003 | 53653.5 |
| n-acetylneuraminate lyase | HMPREF3040_00381 | Not Available | Negative | 361112 - 362005 | 32595.4 |
| transcriptional repressor nanr | HMPREF3040_00382 | Not Available | Negative | 362128 - 362919 | 29481.9 |
| putative cryptic c4-dicarboxylate transporter dcud | HMPREF3040_00383 | Not Available | Positive | 363299 - 364666 | 48803.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





